In the Cellinese Lab we investigate the evolution, systematics and biogeography of angiosperms (flowering plants). In addition, we are interested in semantic data integration and interoperability and are developing tools that serve the biodiversity and phyloinformatics communities (e.g., TOLKIN, BiSciCol and RegNum).

Publications


Lab members in bold

Guralnick, R., Conlin, T., Deck, J., Stucky, B.J., Cellinese, N. 2014. The Trouble with Triplets in Biodiversity Informatics: A Data-Driven Case Against Current Identifier Practices (Submitted).

Cellinese, N. 2014. Taxonomy and Classification. In Evolutionary Biology, Oxford Bibliographies (In Review).

Cellinese, N. 2014. Campanulaceae. In Phylonyms: a Companion to the PhyloCode (K. de Queiroz, P.D. Cantino & J. Gauthier, eds), pp. xx-yy. University of California Press, Berkeley (Accepted).

Cellinese, N. 2014. Campanuloideae. In Phylonyms: a Companion to the PhyloCode (K. de Queiroz, P.D. Cantino & J. Gauthier, eds), pp. xx-yy. University of California Press, Berkeley 
(Accepted).

Cellinese, N. 2014. Lobelioidae. In Phylonyms: a Companion to the PhyloCode (K. de Queiroz, P.D. Cantino & J. Gauthier, eds), pp. xx-yy. University of California Press, Berkeley 
(Accepted).

Stucky, B.J., Deck, J., Conlin, T., Ziemba, L., Cellinese, N., Guralnick, R. 2014. The BISciCol Triplifier: bringing biodiversity data to the Semantic Web. BMC Bioinformatics (In Press, BMC Bioinformatics).

Crowl, A. A., Mavrodiev, E., Mansion, G., Haberle, R., Pistarino, A., Kamari, G., Phitos, D., Borsch, T., Cellinese, N. 2014. Phylogeny of Campanuloideae (Campanulaceae) with emphasis on the utility of pentatricopeptide repeat (PPR) genes. PLoS One 9: e94199.

Fenaroli, F., Pistarino, A., Peruzzi, L. Cellinese, N. 2013. Campanula martinii (Campanulaceae), a new species from northern Italy. Phytotaxa 111(1): 27-38.

Mansion, G., Parolly, G., Crowl, A., Mavrodiev, E., Cellinese, N., Oganesian, M., Fraunhofer, K., Kamari, K., Phitos, D., Haberle, R., Akaydin, G., Ikinci, N., Raus, T., Borsch, T.  2012. How to Handle Speciose Clades? Mass Taxon-Sampling as a Strategy towards Illuminating the Natural History of Campanula (Campanuloideae). PLoS One 7(11): e50076.

Bell, C.D., Mavrodiev, E.V., Soltis, P.S., Calaminus, A.K., Albach, D.C., Cellinese, N., Garcia-Jacas, N., Soltis, D.E. 2012. Rapid diversification of Tragopogon and ecological associates in Eurasia. Journal of Evolutionary Biology 25: 2470-2480.

Beaman, R.S. and Cellinese, N. 2012. Mass digitization of scientific collections: new opportunities to transform the use of biological specimens and underwrite biodiversity science. In: No Specimen Left Behind: Mass Digitization of Natural History Collections, Blagoderov, D. & Smith, V. (Eds). ZooKeys 209: 7-17, special issue.

Cellinese, N., Baum, D.A., Mishler, B.D. 2012. Species and Phylogenetic Nomenclature.  Systematic Biology 61: 885-891.

Mavrodiev, E.V., Laktionov, A.P., and Cellinese, N. 2012. A maximum likelihood approach to generate hypotheses on the evolution and historical biogeography in the Lower Volga Valley regions (Southwest Russia). Ecology & Evolution 2(7): 1765-1779 [doi:10.1002/ece3.282].

Beaman, R.S., Traub, G., Dell, C., Santiago, N., Koh, J., and Cellinese, N. 2012. TOLKIN - Tree of Life Knowledge and Information Network:  Filling a Gap for Collaborative Research in Biological Systematics. PLoS One 7(6): doi:10.1371/journal.pone.0039352

Parr, C. S., R. Guralnick, N. Cellinese, and R. D. M. Page. 2012. Evolutionary informatics: unifying knowledge about the diversity of life. Trends in Ecology & Evolution 27: 94-103.


Godden, G., Jordon-Thaden, I., Chamala, S., Crowl, A., et al. 2012. Making next-generation sequencing work for you: approaches and practical consideration for marker development and phylogenetics. Plant Ecology & Diversity 5: 427-450.

Soltis, D. E., S. A. Smith, N. Cellinese, K. J. Wurdack, D. C. Tank, S. F. Brockington, N. F. Refulio-Rodriguez, J. B. Walker, M. J. Moore, B. S. Carlsward, C. D. Bell, M. Latvis, S. Crawley, C. Black, D. Diouf, Z. Xi, C. A. Rushworth, M. A. Gitzendanner, K. J. Sytsma, Y.-L. Qiu, K. W. Hilu, C. C. Davis, M. J. Sanderson, R. S. Beaman, R. G. Olmstead, W. S. Judd, M. J. Donoghue, and P. S. Soltis. 2011. Angiosperm phylogeny: 17 genes, 640 taxa. American Journal of Botany 98:704-730.

Stoltzfus, A., K. Cranston, H. Lapp, S. McKay, E. Pontelli, R. Vos, and N. Cellinese. 2010. EvoIO: Community-driven standards for sustainable interoperability. Nature Precedings: hdl:10101/npre.2010.4588.1

Wangwasit, K., N. Cellinese, and M. Norsaengsri. 2010. Phyllagathis nanakorniana (Melastomataceae), a new species from Thailand. Blumea - Biodiversity, Evolution and Biogeography of Plants 55:246-248.

Cellinese, N., S. A. Smith, E. J. Edwards, S.-T. Kim, R. C. Haberle, M. Avramakis, and M. J. Donoghue. 2009. Historical Biogeography of the endemic Campanulaceae of Crete. Journal of Biogeography 36:1253-1269.

De Natale, A., and N. Cellinese. 2009. Imperato, Cirillo, and a series of unfortunate events: a novel approach to assess the unknown provenance of historical herbarium specimens. Taxon 58:963-970.

Haberle, R. C., A. Dang, T. Lee, C. Penaflor, H. Cortes-Burn, A. Oestreich, L. Raubenson, N. Cellinese, E. J. Edwards, S.-T. Kim, W. M. M. Eddie, and R. K. Jansen. 2009. Taxonomic and biogeographic implications of a phylogenetic analysis of the Campanulaceae based on three chloroplast genes. Taxon 58:715-734.

Cellinese, N. 2007. Two new species in the genus Poikilogyne (Melastomataceae) from Papua New Guinea. Novon 17: 20-23.

Laurin, M., K. Queiroz, P. Cantino, N. Cellinese, and R. Olmstead. 2005. The PhyloCode, types, ranks and monophyly: a response to Pickett. Cladistics 21:605-607.


Kalmbacher, R., Cellinese, N. & Martin, F. 2005. Seed obtained by vacuuming the soil surface after fire. Native Plants Journal 6: 233-240. 

Cellinese, N. 2004. Melastomataceae. In: The Plants of Mount Kinabalu, 5. Dicotyledon Families Magnoliaceae to Winteraceae (Beaman, J.H. & C. Anderson, Eds). Natural History Publications (Borneo) & Royal Botanic Gardens, Kew. 

Terrell, J.H., Hart, J.P., Barut, S., Cellinese, N., Curet, A., Denham, T., Kusimba, C., Latinis, K.D., Oka, R., Palka, J., Pohl, M.E.D, & Pope, K., Williams, P.R., Haines, H. & Staller, J.E. 2003. Domesticated Landscapes: The Subsistence Ecology of Plants and Animal Domestication. J. Archaeological Method And Theory 10(4): 323-368. 

Cellinese, N. 2003. Revision of the genus Phyllagathis Blume (Melastomataceae: Sonerileae). II. The species of Borneo and Natuna Island. Blumea 48(1): 69-97. 

Cellinese, N. 2002. Revision of the genus Phyllagathis Blume (Melastomataceae: Sonerileae). I. The species of Burma, Thailand, Peninsular Malaysia and Sumatra. Blumea 47(3): 463-492. 

Renner, S.S., Clausing, G., Cellinese, N. & Meyer, K. 2001. Melastomataceae, In K. Larsen and I. Nielsen (Eds.), Flora of Thailand, 7: 412-496. Royal Forest Department, Bangkok, Thailand. 

Cellinese, N. 1997. A new Sonerila (Melastomataceae) from Central Kalimantan, Borneo. Novon 7(2): 103-105. 

Cellinese, N. & Renner, S.S. 1997. New species and combinations of Sonerila and Phyllagathis (Melastomataceae) from Thailand. Novon 7(2): 106-112. 

Cellinese, N. 1997. Notes on the systematics and biogeography of the Sonerila generic alliance (Melastomataceae) with special focus on fruit characters. Tropical Biodiversity 4(1): 83-93. 

Salick, J., Cellinese, N. & Knapp, S. 1997. Indigenous diversity of Cassava: generation, maintanance, use and loss among the Amuesha, Peruvian Upper Amazon. Economic Botany 51(1): 6-19. 

Cellinese, N., Jarvis, C.E., Pichi-Sermolli, R.E.G., Press, J.R., Short, M.J. & Viciani, D. 1996. The Threatened Plants of Italy: Pteridophyta. Mem. Accad. Lunigianese Sci. 66: 117-145.